Official Journal of the Japan Wood Research Society
Table 2 Bacterial and fungal species identified in the logs
From: Microbiological community structure on logs used for groynes in a riverbank system
Bacteria | Fungi | |||||||
|---|---|---|---|---|---|---|---|---|
Identification | Taxonomya | Sampling siteb | Number of clones | Identification | Taxonomya | Sampling siteb | Number of clones | |
Aerial section | Firmicutes sp. | BF | 7 | 1 | Botrytis cinerea | FA | 4 | 2 |
Bradyrhizobium sp. | Bpa | 7 | 1 | Penicillium bialowiezense | FA | 7 | 3 | |
Dongia sp. | Bpa | 7 | 2 | Xeromphalina sp. | FB | 4, 7 | 6 | |
Opitutus sp. | BV | 7 | 1 | Leucosporidium sp. | FB | 7 | 1 | |
Psathyrella abieticola | FB | 7 | 1 | |||||
Camellia sinensis | P | 4 | 1 | |||||
Aqueous section | Bradyrhizobium sp. | Bpa | 1 | 2 | Ramularia sp. | FA | 1 | 3 |
Lactobacillus sp. | BF | 1 | 1 | Xeromphalina sp. | FB | 1 | 1 | |
Staphylococcus warneri | BF | 1 | 1 | Camellia sinensis | P | 1 | 3 | |
Underground section | Caulobacter henricii | Bpa | 5 | 1 | Byssomerulius corium | FB | 2 | 1 |
Dongia sp. | Bpa | 5 | 1 | Mortierella sp. | FM | 5 | 2 | |
Escherichia sp. | FPg | 5 | 1 | Rubellisphaeria abscondita | FA | 5 | 1 | |
Rhizobium sp. | Bpa | 5 | 1 | Xeromphalina sp. | FB | 5 | 3 | |
Staphylococcus sp. | BF | 5 | 1 | Xylodon paradoxus | FB | 2, 9 | 7 | |
Streptomyces sp. | BA | 5 | 1 | Cucumis melo | P | 5 | 1 | |
Pencil-shaped section | Actinomycetes sp. | BAc | 6 | 1 | Uncultured organism clone | U | 6 | 2 |
Anaerosinus sp. | BF | 3 | 1 | |||||
Chloroflexi spp. | BC | 3, 6, 10 | 3 | |||||
Cutibacterium acnes | BA | 3 | 1 | |||||
Dactylosporangium sp. | BA | 3 | 1 | |||||
Firmicutes sp. | BF | 10 | 3 | |||||
Methylocystis sp. | BPa | 3 | 1 | |||||
Pantoea sp. | BPg | 6 | 1 | |||||
Pseudomonas spp. | BPg | 6, 10 | 7 | |||||
Rothia mucilaginosa | BA | 3 | 1 | |||||
Smithella sp. | BPd | 3 | 1 | |||||
Stenotrophomonas maltophilia | BPg | 6 | 1 | |||||
Streptococcus pneumoniae | BF | 6 | 1 | |||||
Syntrophomonas spp. | BF | 6, 10 | 2 | |||||
Veillonellaceae sp. | BF | 10 | 1 | |||||
Zoogloea sp. | BPb | 10 | 1 | |||||